PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J02817.1.p
Common NameEUGRSUZ_J02817, LOC104422986
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB
Protein Properties Length: 302aa    MW: 34008.1 Da    PI: 6.2407
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J02817.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.32e-191461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEde l+++vk +G g W+++a+  g++R++k+c++rw++yl
  Eucgr.J02817.1.p 14 KGAWSAEEDEVLINYVKIHGEGKWRRVAQNAGLNRCAKSCRLRWLNYL 61
                      79********************************************97 PP

2Myb_DNA-binding52.11.5e-1667111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg  T+eE++l+++++++lG++ W++Ia +++ gRt++++k++w++ 
  Eucgr.J02817.1.p  67 RGDITEEEEDLIIRLHRLLGNR-WALIAGRLP-GRTDNEIKNYWNTT 111
                       6788******************.*********.************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.7E-25564IPR009057Homeodomain-like
PROSITE profilePS5129426.904965IPR017930Myb domain
SuperFamilySSF466895.62E-3111108IPR009057Homeodomain-like
SMARTSM007172.0E-161363IPR001005SANT/Myb domain
PfamPF002491.4E-171461IPR001005SANT/Myb domain
CDDcd001671.35E-121661No hitNo description
Gene3DG3DSA:1.10.10.604.1E-2465115IPR009057Homeodomain-like
PROSITE profilePS5129421.03966116IPR017930Myb domain
SMARTSM007172.9E-1666114IPR001005SANT/Myb domain
PfamPF002493.6E-1567111IPR001005SANT/Myb domain
CDDcd001672.89E-1271112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MVRRPCCDKQ GTNKGAWSAE EDEVLINYVK IHGEGKWRRV AQNAGLNRCA KSCRLRWLNY  60
LRPGIKRGDI TEEEEDLIIR LHRLLGNRWA LIAGRLPGRT DNEIKNYWNT TLAKKYGSFS  120
PRSCVRKPNS EQKMLHYQNH GPTNNSDRIN ANQPSGAGTC GIAIIPQEEK HCLEEKSIGL  180
VGNSCSIDNQ DLFSSLLVRD EGAEDHLSFL MSIDINKDFM TGVTGSDSQL CPSNRTAHED  240
NNYDIFGELH NNNLTSSSPF DVTSDDQVVK VESKVMCDQQ LSLHVELKKL ASFLDLEDEW  300
N*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A5e-27141157107B-MYB
1h8a_C5e-271311526127MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J02817.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010033737.10.0PREDICTED: protein ODORANT1-like
TrEMBLA0A059AI790.0A0A059AI79_EUCGR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM4282646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.16e-57myb domain protein 5